FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | 44.fq |
| File type | Conventional base calls |
| Encoding | Illumina 1.5 |
| Total Sequences | 26239522 |
| Filtered Sequences | 0 |
| Sequence length | 49 |
| %GC | 50 |
Per base sequence quality
Per sequence quality scores
![[FAIL]](Icons/error.png)
Per base sequence content
Per base GC content
![[WARN]](Icons/warning.png)
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 2426987 | 9.249356752764019 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC | 1456031 | 5.5489997111990075 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC | 1177275 | 4.486648041835519 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 830034 | 3.163296953351513 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT | 800057 | 3.049053256381728 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 552556 | 2.1058157995408604 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC | 441120 | 1.6811281851856905 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC | 255954 | 0.9754522205091999 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA | 239369 | 0.9122460386282951 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 213248 | 0.8126977313077578 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT | 183407 | 0.6989723364625315 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 180648 | 0.688457663215054 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG | 180494 | 0.6878707622798921 | RNA PCR Primer, Index 1 (100% over 29bp) |
| CGCGACCTCAGATCAGATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA | 179634 | 0.6845932635510662 | RNA PCR Primer, Index 1 (100% over 32bp) |
| CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC | 171125 | 0.6521650813608572 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 160685 | 0.6123777712109237 | RNA PCR Primer, Index 1 (100% over 27bp) |
| ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC | 139536 | 0.5317779797970404 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 132556 | 0.5051768854630813 | RNA PCR Primer, Index 1 (100% over 29bp) |
| CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA | 132402 | 0.5045899845279194 | RNA PCR Primer, Index 1 (100% over 28bp) |
| AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC | 107566 | 0.4099388700754533 | RNA PCR Primer, Index 1 (100% over 26bp) |
| AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT | 106681 | 0.40656609522078946 | RNA PCR Primer, Index 1 (100% over 25bp) |
| AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA | 105159 | 0.4007656846797743 | RNA PCR Primer, Index 1 (100% over 28bp) |
| ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 102007 | 0.3887532707341239 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 100594 | 0.3833682641017622 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT | 97038 | 0.3698161879625704 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 94484 | 0.36008277894696405 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT | 90269 | 0.3440192241306835 | RNA PCR Primer, Index 1 (100% over 25bp) |
| ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA | 86984 | 0.33149994119557513 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC | 84406 | 0.3216750670991644 | RNA PCR Primer, Index 1 (100% over 26bp) |
| ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC | 75963 | 0.2894984138811675 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 66597 | 0.253804166097233 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT | 66293 | 0.2526456084070434 | RNA PCR Primer, Index 1 (100% over 25bp) |
| CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC | 66187 | 0.25224163763349045 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC | 63763 | 0.24300366447224153 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT | 62799 | 0.23932981705992967 | RNA PCR Primer, Index 1 (100% over 30bp) |
| AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC | 60971 | 0.2323632267386578 | RNA PCR Primer, Index 1 (100% over 27bp) |
| ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA | 57746 | 0.2200726065055606 | RNA PCR Primer, Index 1 (100% over 32bp) |
| ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC | 56618 | 0.2157737477077517 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT | 55799 | 0.2126525018253 | RNA PCR Primer, Index 1 (100% over 25bp) |
| ATCACATTGCCAGGGATTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT | 54020 | 0.20587265271067057 | RNA PCR Primer, Index 1 (100% over 30bp) |
| CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC | 53619 | 0.20434442365222963 | RNA PCR Primer, Index 1 (100% over 33bp) |
| TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC | 52276 | 0.19922619017221427 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTA | 50551 | 0.19265213748939483 | RNA PCR Primer, Index 7 (97% over 35bp) |
| CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC | 50037 | 0.1906932603421663 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC | 49817 | 0.18985483043479223 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TACCCATTGCATATCGGAGCTGTGGAATTCTCGGGTGCCAAGGAACTCC | 45253 | 0.1724612209018137 | RNA PCR Primer, Index 1 (100% over 27bp) |
| AATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCC | 45100 | 0.17187813101168536 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 45088 | 0.17183239847128315 | RNA PCR Primer, Index 1 (100% over 28bp) |
| CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA | 43342 | 0.1651783138427598 | RNA PCR Primer, Index 1 (100% over 32bp) |
| AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC | 41778 | 0.15921783941033682 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACT | 41727 | 0.15902347611362738 | RNA PCR Primer, Index 3 (100% over 34bp) |
| AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC | 40361 | 0.1538175885978411 | RNA PCR Primer, Index 1 (100% over 26bp) |
| ATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCCA | 38441 | 0.1465003821334855 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 38205 | 0.14560097550557513 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC | 37807 | 0.14408417958223477 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA | 37642 | 0.1434553571517042 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC | 37077 | 0.14130211670776624 | RNA PCR Primer, Index 1 (100% over 31bp) |
| TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 36604 | 0.139499492406912 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC | 36488 | 0.13905741118302384 | RNA PCR Primer, Index 1 (100% over 26bp) |
| AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC | 36345 | 0.1385124317432307 | RNA PCR Primer, Index 1 (100% over 26bp) |
| GAATTAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTC | 35150 | 0.13395823292817605 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC | 34831 | 0.13274250956248365 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAATGTGAATTGCAGGACATGGAATTCTCGGGTGCCAAGGAACTCCAGT | 34667 | 0.13211749817698662 | RNA PCR Primer, Index 1 (100% over 30bp) |
| AGCTACATCTGGCTACTGGGTCTTGGAATTCTCGGGTGCCAAGGAACTC | 33117 | 0.1262103783750329 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT | 32390 | 0.12343974863566493 | RNA PCR Primer, Index 1 (100% over 25bp) |
| ACTAGACCTAGCCCAAAGATATGGAATTCTCGGGTGCCAAGGAACTCCA | 31814 | 0.12124458669635826 | RNA PCR Primer, Index 1 (100% over 28bp) |
| AAGCTGCCAGTTGAAGAACTTGGAATTCTCGGGTGCCAAGGAACTCCAG | 31042 | 0.11830245993048197 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TAGCTTATCAGACTGATGTTTGGAATTCTCGGGTGCCAAGGAACTCCAG | 30067 | 0.1145866910228014 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA | 29435 | 0.1121781105616177 | RNA PCR Primer, Index 1 (100% over 28bp) |
| ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC | 29335 | 0.11179700605826585 | RNA PCR Primer, Index 1 (100% over 24bp) |
| TCGACCGGACCTCGACCGGCTTGGAATTCTCGGGTGCCAAGGAACTCCA | 28040 | 0.10686170273985936 | RNA PCR Primer, Index 1 (100% over 28bp) |
| CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACTAA | 27951 | 0.10652251973187622 | RNA PCR Primer, Index 3 (97% over 36bp) |
| TGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 27315 | 0.10409869509055844 | RNA PCR Primer, Index 1 (100% over 27bp) |
| AGAGGTAAAAAATTGATTTGACTGGAATTCTCGGGTGCCAAGGAACTCC | 26833 | 0.10226177138440251 | RNA PCR Primer, Index 1 (100% over 27bp) |
| AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 26687 | 0.1017053588095088 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC | 26266 | 0.10010090885039749 | No Hit |
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTCTC | 26584675 | 28.379475 | 383.03992 | 28 |
| AATTC | 26837800 | 27.266708 | 365.06873 | 26 |
| TGCCA | 27914625 | 26.874836 | 343.60715 | 36 |
| ATTCT | 26579875 | 26.517908 | 358.34863 | 27 |
| TCTCG | 26452325 | 25.00797 | 339.06085 | 29 |
| GCCAA | 24867425 | 24.380594 | 349.83743 | 37 |
| CCAAG | 24801475 | 24.315933 | 349.89572 | 38 |
| GAACT | 26812970 | 24.125275 | 320.37103 | 43 |
| AACTC | 21535785 | 23.841444 | 394.25665 | 44 |
| GAATT | 27066300 | 22.349619 | 297.14688 | 25 |
| CTCGG | 26397795 | 22.101606 | 299.91794 | 30 |
| ACTCC | 18148080 | 21.497562 | 421.64288 | 45 |
| GTGCC | 25407310 | 21.272318 | 298.87558 | 35 |
| CAAGG | 24605930 | 19.606888 | 284.14352 | 39 |
| GGAAT | 26785515 | 19.587671 | 262.91806 | 24 |
| TGGAA | 26470750 | 19.35749 | 262.82468 | 23 |
| GGAAC | 23970610 | 19.100643 | 283.7636 | 42 |
| AAGGA | 24428320 | 18.191805 | 265.65793 | 40 |
| AGGAA | 24172170 | 18.00105 | 265.57425 | 41 |
| TCGGG | 26158195 | 17.799974 | 243.52654 | 31 |
| CGGGT | 26116385 | 17.771526 | 243.13287 | 32 |
| GGTGC | 25908880 | 17.630322 | 243.18092 | 34 |
| GGGTG | 26079315 | 14.423257 | 197.5958 | 33 |
| CTCCA | 10289370 | 12.188417 | 118.35017 | 45 |
| CCAGT | 8960130 | 8.626375 | 116.94645 | 7 |
| TTGGA | 11946080 | 8.578449 | 166.10841 | 22 |
| TCCAG | 8631335 | 8.309828 | 80.098564 | 45 |
| CAGTC | 5568150 | 5.360743 | 39.74623 | 44 |
| TGTTG | 7549875 | 5.3238244 | 133.90498 | 17 |
| GACTG | 6422380 | 5.0253406 | 150.33862 | 11 |
| GTTGA | 6880730 | 4.9410343 | 127.27473 | 18 |
| TCAGA | 5458695 | 4.9115224 | 182.47047 | 8 |
| TGATG | 6483405 | 4.6557164 | 137.62173 | 14 |
| AGTCA | 5022805 | 4.5193257 | 37.153774 | 45 |
| TATCA | 4395780 | 4.4660306 | 194.5013 | 6 |
| TTATC | 4438545 | 4.4281974 | 190.99278 | 5 |
| CAGAC | 4482125 | 4.394378 | 187.91458 | 9 |
| ACTGA | 4874140 | 4.385563 | 172.41618 | 12 |
| CTTAT | 4341680 | 4.331558 | 190.88548 | 4 |
| CTGAT | 4843450 | 4.2793984 | 169.47777 | 13 |
| ATCAG | 4698875 | 4.227866 | 172.63278 | 7 |
| AGACT | 4611600 | 4.1493397 | 172.71758 | 10 |
| CTGGA | 5295265 | 4.1434026 | 47.82536 | 23 |
| ATGGA | 5664895 | 4.142616 | 66.753975 | 22 |
| AGCTT | 4687560 | 4.141663 | 169.04526 | 2 |
| TAGCT | 4438865 | 3.92193 | 169.09567 | 1 |
| GCTTA | 4351015 | 3.844311 | 169.06686 | 3 |
| ATGTT | 4408700 | 3.5748048 | 154.9766 | 16 |
| CTTGG | 4544105 | 3.491551 | 36.91291 | 23 |
| GTCAC | 3623335 | 3.4883697 | 30.948997 | 45 |
| GTGGA | 5353360 | 3.4044845 | 31.001816 | 20 |
| TCACT | 3024545 | 3.288005 | 31.954391 | 45 |
| GATGT | 4561905 | 3.2758918 | 137.55515 | 15 |
| AGAAC | 3357520 | 3.0764182 | 111.19435 | 15 |
| CTGTT | 3480005 | 3.0193145 | 108.19558 | 19 |
| CACTA | 2701240 | 2.99044 | 25.337288 | 45 |
| AACTG | 3291445 | 2.961515 | 107.8817 | 17 |
| CTGCC | 2852520 | 2.9385252 | 125.01128 | 4 |
| AAGCT | 3106095 | 2.7947443 | 109.38728 | 1 |
| AAGAA | 3232720 | 2.768268 | 104.13408 | 14 |
| ACTGT | 3130415 | 2.7658577 | 105.3286 | 18 |
| GTTGG | 4271310 | 2.6673906 | 79.253944 | 21 |
| AGCTG | 3397400 | 2.6583745 | 94.76713 | 2 |
| CAGTT | 3000430 | 2.6510105 | 107.273926 | 8 |
| TTGAC | 2972745 | 2.6265495 | 94.72516 | 19 |
| GCCAG | 3046385 | 2.5974095 | 103.64229 | 6 |
| ACTTG | 2918980 | 2.5790458 | 33.959095 | 22 |
| AGTTG | 3495165 | 2.5098686 | 87.116165 | 9 |
| TTGAA | 3024365 | 2.4973269 | 100.60496 | 11 |
| TGACT | 2761375 | 2.4397948 | 82.66247 | 20 |
| GCTGC | 2800350 | 2.3445988 | 101.37277 | 3 |
| TTTGG | 3313345 | 2.3364184 | 47.398335 | 21 |
| ACTGG | 2906545 | 2.2742937 | 44.034878 | 22 |
| TGAAG | 2987325 | 2.1845665 | 89.00098 | 12 |
| GAAGA | 2892165 | 2.1537995 | 90.41174 | 13 |
| ACTAA | 1873895 | 1.9387885 | 16.820822 | 45 |
| GTAGT | 2576475 | 1.85016 | 58.21124 | 5 |
| GATGG | 2832445 | 1.8013014 | 48.73826 | 21 |
| AGTAG | 2448595 | 1.7906048 | 58.93897 | 7 |
| TAATC | 1730710 | 1.7583691 | 26.35916 | 7 |
| GTTTG | 2339390 | 1.6496302 | 43.413128 | 20 |
| TAGTA | 1966250 | 1.6236032 | 66.79632 | 6 |
| GACTT | 1816060 | 1.6045679 | 33.61049 | 21 |
| TAGTT | 1893825 | 1.5356125 | 52.35798 | 18 |
| GTAGA | 2091215 | 1.5292605 | 41.00851 | 8 |
| CTAAT | 1473835 | 1.4973888 | 11.898719 | 45 |
| AGGTA | 2031485 | 1.4855813 | 61.655552 | 3 |
| TCACA | 1335125 | 1.478066 | 56.742912 | 2 |
| CGTGG | 2133750 | 1.4519619 | 19.112072 | 19 |
| TTGAT | 1777235 | 1.4410752 | 55.723343 | 19 |
| TTGTA | 1773725 | 1.4382291 | 55.04348 | 13 |
| TGAGG | 2166330 | 1.3776838 | 51.403957 | 1 |
| GGTAG | 2159570 | 1.3733847 | 51.780403 | 4 |
| GCTTG | 1782220 | 1.3694034 | 25.66085 | 20 |
| TGTAT | 1680750 | 1.36284 | 52.688183 | 14 |
| TGTGG | 2171035 | 1.3557898 | 12.5285015 | 20 |
| GAGGT | 2085710 | 1.3264133 | 53.78893 | 2 |
| GCACT | 1377170 | 1.3258721 | 26.73812 | 5 |
| ATAGT | 1589530 | 1.3125322 | 53.966393 | 17 |
| ATTGT | 1617205 | 1.3113145 | 45.144276 | 12 |
| AGTGG | 2052410 | 1.3052359 | 28.857391 | 6 |
| AGTTT | 1606935 | 1.3029869 | 39.60326 | 19 |
| GATTG | 1786275 | 1.2827193 | 40.432686 | 11 |
| AGATT | 1523960 | 1.2583886 | 45.817818 | 10 |
| TATAG | 1518375 | 1.2537769 | 52.26007 | 16 |
| GTATA | 1516270 | 1.2520386 | 52.486313 | 15 |
| ACAGT | 1371170 | 1.2337258 | 40.498383 | 4 |
| CCGTG | 1465505 | 1.2269969 | 22.451052 | 18 |
| GCTGT | 1587680 | 1.2199248 | 11.883528 | 17 |
| CATGG | 1554300 | 1.2161982 | 8.167042 | 23 |
| TAGAT | 1453630 | 1.2003146 | 45.723446 | 9 |
| CACAG | 1219870 | 1.1959885 | 45.694134 | 3 |
| AATCC | 1079040 | 1.1945641 | 28.756075 | 8 |
| GGCTA | 1495950 | 1.1705408 | 35.235783 | 9 |
| CTGTG | 1496605 | 1.1499454 | 10.631943 | 21 |
| TCCCG | 1114750 | 1.1483605 | 23.65852 | 12 |
| TGGCT | 1491995 | 1.1464032 | 34.92161 | 8 |
| TTCAC | 1042795 | 1.1336302 | 48.82999 | 1 |
| GTTCC | 1187775 | 1.1229199 | 30.481833 | 15 |
| CAGTG | 1425860 | 1.1156974 | 35.460754 | 5 |
| GGCTT | 1435805 | 1.1032287 | 26.14539 | 19 |
| ATTGC | 1237600 | 1.0934734 | 25.607344 | 2 |
| CAGGA | 1369510 | 1.0912749 | 26.821548 | 12 |
| GCTAA | 1206775 | 1.0858096 | 42.44794 | 10 |
| AAGTA | 1275380 | 1.0724579 | 27.704346 | 4 |
| GCCTG | 1280695 | 1.0722644 | 18.470734 | 17 |
| CACTT | 972260 | 1.056951 | 29.391088 | 6 |
| AGGCT | 1350515 | 1.0567418 | 21.822023 | 18 |
| CTAAG | 1164805 | 1.0480465 | 40.69272 | 11 |
| TTCAA | 1029725 | 1.0461814 | 33.30097 | 1 |
| CCTGT | 1058645 | 1.0008407 | 20.750507 | 18 |
| AGTTC | 1128145 | 0.996765 | 38.43499 | 14 |
| AATCG | 1087380 | 0.9783825 | 7.4416056 | 45 |
| TTGCA | 1104255 | 0.9756573 | 25.46142 | 3 |
| AAGTT | 1171475 | 0.9673291 | 36.583897 | 13 |
| TAAGT | 1163020 | 0.96034753 | 37.307312 | 12 |
| CCAGG | 1109700 | 0.94615257 | 22.698847 | 11 |
| AAAGC | 952640 | 0.87288207 | 12.614094 | 14 |
| GACCT | 903430 | 0.8697783 | 12.00235 | 4 |
| AAGCA | 945795 | 0.86661017 | 12.653471 | 15 |
| ATCGA | 951455 | 0.85608244 | 6.636128 | 45 |
| CAAGT | 941510 | 0.84713435 | 29.600935 | 3 |
| TCTGG | 1061795 | 0.81585073 | 7.487697 | 8 |
| GTGGC | 1183280 | 0.8051914 | 31.358267 | 7 |
| GTAAT | 963210 | 0.79535717 | 27.213903 | 6 |
| TGCAC | 820220 | 0.78966767 | 27.394613 | 4 |
| TCCGT | 832545 | 0.78708625 | 25.46074 | 17 |
| TTCCG | 829015 | 0.783749 | 27.457935 | 16 |
| AGGAT | 1069940 | 0.7824241 | 24.104391 | 13 |
| GCTGG | 1149520 | 0.7822187 | 5.2367992 | 21 |
| ATAGG | 1066005 | 0.7795465 | 26.509716 | 16 |
| TTTTG | 966050 | 0.76920474 | 10.584787 | 14 |
| TAGGC | 966290 | 0.75609607 | 21.506035 | 17 |
| GGCCT | 897425 | 0.7513709 | 18.767406 | 16 |
| GGACT | 952835 | 0.74556786 | 17.28465 | 4 |
| TCCTT | 687395 | 0.7338028 | 13.605242 | 11 |
| TTGTC | 843255 | 0.7316231 | 23.545113 | 9 |
| ATCCC | 616740 | 0.73056805 | 24.316303 | 8 |
| CCCGG | 798855 | 0.72880316 | 20.295862 | 13 |
| TGCTG | 946320 | 0.72712326 | 8.899161 | 16 |
| ATCCA | 652385 | 0.72223055 | 28.51955 | 9 |
| CCGGC | 791380 | 0.72198373 | 20.327816 | 14 |
| TCAAG | 798800 | 0.7187293 | 29.453882 | 2 |
| CCCAA | 594095 | 0.7166612 | 18.052282 | 10 |
| TCGAT | 796875 | 0.70407367 | 5.2142386 | 44 |
| TTCTG | 811235 | 0.7038419 | 10.191136 | 16 |
| CCCGT | 681785 | 0.70234126 | 5.402817 | 14 |
| AGTAA | 829990 | 0.69793254 | 27.553568 | 5 |
| AGCAC | 710510 | 0.6966003 | 12.053615 | 15 |
| CTTGT | 800035 | 0.69412464 | 23.52161 | 8 |
| CTACT | 634805 | 0.6901012 | 9.941402 | 13 |
| CAGAA | 749270 | 0.6865389 | 19.390156 | 15 |
| CGGCC | 752425 | 0.6864447 | 20.321249 | 15 |
| TGAAT | 823375 | 0.6798904 | 7.8157263 | 9 |
| ACATG | 746130 | 0.6713389 | 8.723597 | 22 |
| GGATA | 912350 | 0.6671819 | 23.967249 | 14 |
| GTCCC | 647605 | 0.66713065 | 22.964342 | 11 |
| TATTG | 814410 | 0.66036624 | 18.786602 | 1 |
| ACCAC | 547290 | 0.6602 | 6.1814055 | 6 |
| AGCAG | 827705 | 0.65954506 | 10.995929 | 16 |
| TATGG | 915760 | 0.6576049 | 8.5435095 | 22 |
| TTCCC | 553560 | 0.643908 | 6.4976315 | 12 |
| CCATA | 577385 | 0.63920087 | 14.184357 | 2 |
| CATTG | 722900 | 0.63871354 | 8.848049 | 5 |
| GATAG | 873340 | 0.63865477 | 24.405737 | 15 |
| AACAT | 615070 | 0.63637006 | 13.872335 | 5 |
| GGGCT | 911960 | 0.62056524 | 8.36159 | 18 |
| AAAGT | 734525 | 0.6176567 | 10.691461 | 6 |
| CTCCT | 528665 | 0.6149499 | 14.777872 | 10 |
| CTGTA | 695960 | 0.6149109 | 8.516743 | 19 |
| ACATC | 554210 | 0.6135447 | 14.81909 | 6 |
| CGACC | 584610 | 0.6132907 | 12.300439 | 3 |
| CGATC | 635465 | 0.61179465 | 5.6763186 | 45 |
| TAGAA | 715955 | 0.6020414 | 11.981158 | 10 |
| CCAAA | 533565 | 0.60153186 | 15.383145 | 11 |
| TTGTG | 849165 | 0.5987921 | 8.520683 | 19 |
| CCACG | 570280 | 0.5982577 | 5.23635 | 7 |
| CTTTT | 609705 | 0.5973194 | 12.575164 | 13 |
| CAGAT | 663030 | 0.59656876 | 10.292661 | 9 |
| CACCA | 492175 | 0.5937144 | 6.496759 | 5 |
| TGTCC | 623530 | 0.5894839 | 20.446856 | 10 |
| CTCAG | 611085 | 0.5883228 | 11.00941 | 7 |
| CAACG | 592680 | 0.5810771 | 13.585947 | 1 |
| CGGAA | 728915 | 0.58082575 | 11.18271 | 4 |
| CTGAA | 643270 | 0.5787895 | 5.502026 | 8 |
| GCAGC | 678065 | 0.5781319 | 11.571026 | 17 |
| TCGGT | 751150 | 0.57716066 | 8.279617 | 15 |
| CCCAT | 487200 | 0.5771196 | 14.819902 | 1 |
| GTGCT | 746080 | 0.573265 | 8.807424 | 15 |
| ACCTC | 480570 | 0.56926596 | 14.43744 | 5 |
| TTTGT | 714320 | 0.568768 | 12.499037 | 12 |
| ATCTG | 639760 | 0.56525576 | 8.464757 | 7 |
| CTGTC | 596285 | 0.56372654 | 11.164042 | 12 |
| CAAAG | 612470 | 0.56119215 | 13.973688 | 1 |
| GCTAC | 581325 | 0.55967134 | 11.143204 | 2 |
| ACATT | 549640 | 0.55842394 | 10.8997 | 2 |
| ACGGA | 690755 | 0.55041844 | 11.563115 | 3 |
| TCCCA | 464345 | 0.5500464 | 16.16442 | 9 |
| AGAAA | 641770 | 0.5495655 | 10.876933 | 11 |
| CTCTG | 574775 | 0.54339105 | 5.2029576 | 22 |
| TGGAC | 687855 | 0.53822815 | 16.977291 | 3 |
| CATAA | 519575 | 0.53756803 | 12.863997 | 3 |
| CGTTC | 566735 | 0.5357901 | 5.365562 | 10 |
| ATTCC | 491470 | 0.53428066 | 7.4884005 | 1 |
| GAATC | 592195 | 0.5328342 | 12.615006 | 6 |
| ATAAA | 547185 | 0.5290938 | 12.0338745 | 4 |
| GTCAG | 671430 | 0.525376 | 16.691593 | 13 |
| TGTCT | 603825 | 0.52388936 | 5.1103387 | 10 |
| TCTCC | 447755 | 0.5208343 | 14.963413 | 9 |
| GCCCA | 492065 | 0.5162055 | 5.7341743 | 11 |
| CCTTT | 476725 | 0.50890994 | 13.533427 | 12 |
| AAAGA | 593360 | 0.50811064 | 11.018648 | 2 |
| CTACA | 454775 | 0.50346404 | 12.855001 | 3 |
| GAAAG | 674785 | 0.50251335 | 9.525761 | 12 |
| AGGTT | 698610 | 0.50167 | 8.14201 | 10 |
| AATTG | 606160 | 0.50052816 | 5.8059974 | 11 |
| TACTG | 558815 | 0.49373734 | 8.116993 | 14 |
| CAGCT | 508465 | 0.48952526 | 14.2640505 | 18 |
| GACAT | 539205 | 0.48515582 | 8.210404 | 21 |
| TAAAG | 573220 | 0.4820166 | 10.469176 | 5 |
| CCTCA | 403520 | 0.47799528 | 13.433815 | 6 |
| GTAAA | 563885 | 0.47416684 | 11.34389 | 2 |
| GAGTC | 605385 | 0.47369757 | 16.75699 | 11 |
| TTCCA | 434110 | 0.4719242 | 6.720937 | 2 |
| GAAGG | 726370 | 0.4704162 | 12.940211 | 17 |
| AGAAG | 616270 | 0.45893717 | 15.628953 | 16 |
| AAACA | 432700 | 0.45590198 | 14.090228 | 4 |
| ATTCA | 448445 | 0.45561177 | 10.899113 | 4 |
| TAGGT | 631230 | 0.45328462 | 7.8465266 | 9 |
| GTTGT | 639965 | 0.45127386 | 8.171317 | 18 |
| GGTCT | 582175 | 0.44732544 | 6.815868 | 19 |
| ACTAC | 403470 | 0.44666627 | 8.06696 | 16 |
| CAAAA | 421935 | 0.44455975 | 14.629855 | 12 |
| AAAAG | 515530 | 0.44146273 | 11.871877 | 13 |
| TGTAA | 534380 | 0.44125676 | 11.187558 | 1 |
| CAGCA | 447530 | 0.43876868 | 9.76132 | 4 |
| TGGAG | 688170 | 0.43764368 | 13.700167 | 9 |
| TGACA | 480135 | 0.43200693 | 7.8390846 | 20 |
| AGAAT | 513490 | 0.43179 | 10.825778 | 4 |
| GATCT | 485855 | 0.429274 | 5.0642037 | 45 |
| CATCT | 390990 | 0.4250481 | 9.925674 | 6 |
| TGGGC | 620275 | 0.42208108 | 8.8507 | 17 |
| CATCC | 356310 | 0.42207202 | 15.718387 | 7 |
| AAGGC | 526145 | 0.41925123 | 11.039493 | 18 |
| GGAGT | 657020 | 0.41783375 | 13.660965 | 10 |
| CCACC | 323155 | 0.41711476 | 6.8908873 | 4 |
| GATCA | 462690 | 0.41631058 | 10.259925 | 11 |
| TAAAC | 401130 | 0.41502124 | 13.8760605 | 3 |
| GTAGG | 650755 | 0.4138495 | 7.352187 | 8 |
| ATCAC | 373540 | 0.4135319 | 7.3702784 | 1 |
| CTGGC | 490285 | 0.41049206 | 7.980858 | 9 |
| AGACC | 413420 | 0.40532646 | 5.8501744 | 4 |
| CACAT | 363130 | 0.40200737 | 7.2317166 | 3 |
| CCCCG | 354280 | 0.39767975 | 7.823791 | 10 |
| GTTCT | 455080 | 0.39483553 | 9.950329 | 15 |
| CGACT | 409140 | 0.3939 | 7.907391 | 13 |
| TGTTT | 491320 | 0.39120716 | 7.2570715 | 19 |
| CTGGG | 566685 | 0.38561448 | 6.163938 | 16 |
| TCTGT | 443965 | 0.38519195 | 6.4984365 | 17 |
| TCCAT | 350935 | 0.38150403 | 6.1295805 | 14 |
| AACGC | 388710 | 0.3811002 | 9.85588 | 8 |
| CGCTG | 454110 | 0.3802045 | 8.30597 | 10 |
| AGATC | 419760 | 0.37768385 | 10.129101 | 10 |
| TACAT | 371630 | 0.37756917 | 11.615221 | 4 |
| CGGTG | 552235 | 0.37578166 | 7.9961424 | 16 |
| CCCAG | 356270 | 0.37374845 | 5.202953 | 32 |
| GTCGG | 546565 | 0.37192333 | 7.4133353 | 14 |
| AACGG | 466605 | 0.37180763 | 11.512006 | 2 |
| GGTTG | 593960 | 0.37092212 | 7.1399918 | 11 |
| TCTCT | 340450 | 0.36343467 | 6.5716734 | 21 |
| CATTC | 334135 | 0.36324066 | 11.859988 | 3 |
| TCAAC | 327440 | 0.36249632 | 11.053298 | 6 |
| CCGAC | 344510 | 0.3614115 | 8.498823 | 12 |
| GTCTC | 381715 | 0.36087254 | 6.2169704 | 20 |
| GATTT | 443790 | 0.3598481 | 7.738355 | 15 |
| GGATT | 499230 | 0.35849577 | 5.019655 | 14 |
| AGATG | 487035 | 0.3561582 | 6.576162 | 15 |
| ATCCT | 318305 | 0.3460317 | 7.2959986 | 8 |
| TCCCC | 272110 | 0.34489727 | 8.756239 | 9 |
| AGCTA | 366060 | 0.32936665 | 10.396489 | 1 |
| GCGAC | 376680 | 0.32116503 | 9.766772 | 2 |
| GTTAT | 389305 | 0.31566888 | 5.3916636 | 20 |
| TACTT | 314625 | 0.31389153 | 6.370568 | 18 |
| GAAGC | 386900 | 0.30829582 | 7.04436 | 19 |
| TGAGT | 426795 | 0.30648038 | 6.706768 | 19 |
| TTGGG | 483510 | 0.30194718 | 8.223129 | 16 |
| TAATT | 321875 | 0.30011442 | 6.693967 | 7 |
| ACTAG | 332830 | 0.2994676 | 5.152603 | 1 |
| CGCGA | 350785 | 0.2990864 | 9.887156 | 1 |
| TGTGC | 388055 | 0.29816958 | 8.681393 | 14 |
| TGGGT | 475655 | 0.2970418 | 5.6551313 | 17 |
| TTATG | 365615 | 0.2964598 | 5.482559 | 21 |
| CATAG | 326480 | 0.2937541 | 6.81591 | 16 |
| CCCGA | 277265 | 0.2908675 | 7.3873463 | 11 |
| CTAGA | 319040 | 0.28705984 | 5.154703 | 2 |
| ACGCT | 296660 | 0.28560975 | 9.402401 | 9 |
| AGCCC | 268785 | 0.28197148 | 6.0145445 | 10 |
| AGCAT | 298665 | 0.26872724 | 5.1229234 | 4 |
| GGTGA | 415630 | 0.2643211 | 6.1008844 | 17 |
| GGAAG | 407895 | 0.26416346 | 6.2684255 | 18 |
| TGTCG | 343710 | 0.26409623 | 8.209802 | 13 |
| TCCAC | 212645 | 0.2518916 | 5.9215493 | 3 |
| GGGTC | 369010 | 0.2511018 | 6.037693 | 18 |
| TAGAC | 276460 | 0.24874803 | 5.191545 | 3 |
| TCAGG | 309885 | 0.24247672 | 5.6331387 | 11 |
| GTGAG | 379310 | 0.24122328 | 5.771002 | 18 |
| TTCAG | 268650 | 0.23736395 | 6.5617776 | 10 |
| CAACA | 209245 | 0.23589918 | 5.590667 | 1 |
| TTGCC | 228065 | 0.21561216 | 6.23731 | 7 |
| TAGCA | 219985 | 0.197934 | 6.657956 | 1 |
| TAGCC | 201050 | 0.19356112 | 5.330843 | 9 |
| CTAGC | 199045 | 0.1916308 | 5.231798 | 8 |
| ACCTA | 165965 | 0.18373352 | 5.959018 | 6 |
| CCTAG | 169770 | 0.16344626 | 5.2027745 | 7 |